http://biocyc.org en-us SRI International BioCyc Webinars: The BioCyc Webinar series introduces users to the basic and advanced features of the BioCyc website and the Pathway Tools software system via a combination of narration and practical demonstration. Tour one of our many model organism databases or make your own, all with BioCyc and Pathway Tools. BioCyc Webinars SRI International no http://feeds.feedburner.com/BioCycWebinars BioCyc Webinars: The BioCyc Webinar series introduces users to the basic and advanced features of the BioCyc website and the Pathway Tools software system via a combination of narration and practical demonstration. Tour one of our many model organism databases or make your own, all with BioCyc and Pathway Tools.ptools-info@ai.sri.comSRI International http://bioinformatics.ai.sri.com/ptools/webinars/2009webinars/2009SAQPQUICK.m4v SRI International Structured Advanced Query Page Quick Introduction Get a jumpstart on using the SAQP with this brief intro. Fri, 15 May 2009 18:01:00 -0800 6:27 BioCyc, Bioinformatics, SRI International ptools-info@ai.sri.com (SRI International)no http://bioinformatics.ai.sri.com/ptools/webinars/2009webinars/2009SAQP.m4v SRI International The Structured Advanced Query Page Expand your use of BioCyc by learning how to run queries across one or several databases with the Structured Advanced Query Page. Fri, 8 May 2009 10:35:00 -0800 42:15 BioCyc, Bioinformatics, SRI International ptools-info@ai.sri.com (SRI International)no http://bioinformatics.ai.sri.com/ptools/webinars/2009webinars/2009INTROBIOCYC08.mov SRI International Introduction to BioCyc, Part 8 - Compounds Round out your introductory tour with a visit to BioCyc's representation of compounds. Thu, 30 Apr 2009 17:45:00 -0800 3:53 BioCyc, Bioinformatics, SRI International ptools-info@ai.sri.com (SRI International)no http://bioinformatics.ai.sri.com/ptools/webinars/2009webinars/2009INTROBIOCYC07.mov SRI International Introduction to BioCyc, Part 7 - Reactions Find out how BioCyc handles metabolic reactions. Thu, 30 Apr 2009 17:44:00 -0800 2:50 BioCyc, Bioinformatics, SRI International ptools-info@ai.sri.com (SRI International)no http://bioinformatics.ai.sri.com/ptools/webinars/2009webinars/2009INTROBIOCYC06.mov SRI International Introduction to BioCyc, Part 6 - Proteins Find out how BioCyc represents proteins. Thu, 30 Apr 2009 17:42:00 -0800 7:51 BioCyc, Bioinformatics, SRI International ptools-info@ai.sri.com (SRI International)no http://bioinformatics.ai.sri.com/ptools/webinars/2009webinars/2009INTROBIOCYC05.mov SRI International Introduction to BioCyc, Part 5 - Pathways Learn how to use BioCyc to understand metabolic and signaling pathways. Thu, 30 Apr 2009 17:39:00 -0800 6:49 BioCyc, Bioinformatics, SRI International ptools-info@ai.sri.com (SRI International)no http://bioinformatics.ai.sri.com/ptools/webinars/2009webinars/2009INTROBIOCYC04.mov SRI International Introduction to BioCyc, Part 4 - Genes and Operons Learn about how BioCyc represents genes, operons, and gene regulation. Thu, 30 Apr 2009 17:38:00 -0800 9:51 BioCyc, Bioinformatics, SRI International ptools-info@ai.sri.com (SRI International)no http://bioinformatics.ai.sri.com/ptools/webinars/2009webinars/2009INTROBIOCYC03.mov SRI International Introduction to BioCyc, Part 3 - The Big Picture: Metabolic and Genome Overviews Learn about the BioCyc tools that will let you take a high-level view of your favorite organism's biology. Thu, 30 Apr 2009 17:36:00 -0800 11:22 BioCyc, Bioinformatics, SRI International ptools-info@ai.sri.com (SRI International)no http://bioinformatics.ai.sri.com/ptools/webinars/2009webinars/2009INTROBIOCYC02.mov SRI International Introduction to BioCyc, Part 2 - Searching in BioCyc Learn how to find what you need using the quick, intermediate, and advanced search tools of BioCyc. Thu, 30 Apr 2009 17:34:00 -0800 20:57 BioCyc, Bioinformatics, SRI International ptools-info@ai.sri.com (SRI International)no http://bioinformatics.ai.sri.com/ptools/webinars/2009webinars/2009INTROBIOCYC01.mov SRI International Introduction to BioCyc, Part 1 - BioCyc overview Start learning about the BioCyc site, its contents, and how to use them. Thu, 30 Apr 2009 17:32:00 -0800 6:00 BioCyc, Bioinformatics, SRI International ptools-info@ai.sri.com (SRI International)no http://bioinformatics.ai.sri.com/ptools/webinars/2009webinars/2009BIOCYCUPDATE.mov SRI International Transition to the new BioCyc web site We've completely revised the BioCyc web site. This webinar will introduce experienced users to key features of the new site, giving you a jump start on getting even more out of BioCyc than before. Thu, 30 Apr 2009 17:28:00 -0800 11:26 BioCyc, Bioinformatics, SRI International ptools-info@ai.sri.com (SRI International)no http://bioinformatics.ai.sri.com/ptools/webinars/webinars-makemod/MAKINGMOD02D.mov SRI International Making a Model Organism Database - Part 2D: Making and Editing Pathways This webinar series walks you through the process of making and editing a model organism database using Pathway Tools. Now that we've covered reactions and proteins, part two continues with a look at making and editing metabolic pathways. Tue, 27 Nov 2007 18:27:00 -0800 9:42 BioCyc, Bioinformatics, SRI International ptools-info@ai.sri.com (SRI International)no http://bioinformatics.ai.sri.com/ptools/webinars/webinars-makemod/MAKINGMOD02C.mov SRI International Making a Model Organism Database - Part 2C: Working With Proteins, Citations, GO Terms, and Enzymatic Reactions This webinar series walks you through the process of making and editing a model organism database using Pathway Tools. In this section of part two, we cover making and editing proteins and protein complexes, as well as assigning GO terms, including literature citations in your database, and linking enzymes to their reactions. Tue, 27 Nov 2007 18:25:00 -0800 26:10 BioCyc, Bioinformatics, SRI International ptools-info@ai.sri.com (SRI International)no http://bioinformatics.ai.sri.com/ptools/webinars/webinars-makemod/MAKINGMOD02B.mov SRI International Making a Model Organism Database - Part 2B: Creating and Editing Reactions and Compounds This webinar series walks you through the process of making and editing a model organism database using Pathway Tools. Part two continues with a detailed look at creating and editing chemical reactions and compounds. Tue, 27 Nov 2007 18:23:00 -0800 17:32 BioCyc, Bioinformatics, SRI International ptools-info@ai.sri.com (SRI International)no http://bioinformatics.ai.sri.com/ptools/webinars/webinars-makemod/MAKINGMOD02A.mov SRI International Making a Model Organism Database - Part 2: General Editing Strategies This webinar series walks you through the process of making and editing a model organism database using Pathway Tools. Part two begins by discussing the general strategy involved in editing your database, from choosing an emphasis through finding information. Tue, 27 Nov 2007 18:20:00 -0800 8:00 BioCyc, Bioinformatics, SRI International ptools-info@ai.sri.com (SRI International)no http://bioinformatics.ai.sri.com/ptools/webinars/webinars-makemod/MAKINGMOD01.mov SRI International Making a Model Organism Database - Part 1: Building the Database This webinar series walks you through the process of making and editing a model organism database using Pathway Tools. Part one takes you from a Genbank file for your organism of interest through draft database construction, pathway and other predictions, and the pathway hole-filling process. Thu, 27 Sep 2007 15:01:00 -0800 56:42 BioCyc, Bioinformatics, SRI International ptools-info@ai.sri.com (SRI International)no http://bioinformatics.ai.sri.com/ptools/webinars/webinars-compomics/WEBINARCOMPOMICS04.mov SRI International Comparative and Omics Tools in BioCyc - Part 4: Ortholog Viewing This webinar series introduces some of the comparative genomics and omics viewing tools available on the BioCyc site, including the cellular overview, comparative genomics tools, the ortholog viewer, and the metabolic omics viewer. Thu, 21 Jun 2007 17:39:00 -0800 10:02 BioCyc, Bioinformatics, SRI International ptools-info@ai.sri.com (SRI International)no http://bioinformatics.ai.sri.com/ptools/webinars/webinars-compomics/WEBINARCOMPOMICS03.mov SRI International Comparative and Omics Tools in BioCyc - Part 3: Comparative Genomics This webinar series introduces some of the comparative genomics and omics viewing tools available on the BioCyc site, including the cellular overview, comparative genomics tools, the ortholog viewer, and the metabolic omics viewer. Thu, 21 Jun 2007 17:37:00 -0800 21:06 BioCyc, Bioinformatics, SRI International ptools-info@ai.sri.com (SRI International)no http://bioinformatics.ai.sri.com/ptools/webinars/webinars-compomics/WEBINARCOMPOMICS02.mov SRI International Comparative and Omics Tools in BioCyc - Part 2: The Cellular Omics Viewer This webinar series introduces some of the comparative genomics and omics viewing tools available on the BioCyc site, including the cellular overview, comparative genomics tools, the ortholog viewer, and the metabolic omics viewer. Thu, 21 Jun 2007 17:32:00 -0800 36:41 BioCyc, Bioinformatics, SRI International ptools-info@ai.sri.com (SRI International)no http://bioinformatics.ai.sri.com/ptools/webinars/webinars-compomics/WEBINARCOMPOMICS01.mov SRI International Comparative and Omics Tools in BioCyc - Part 1: The Cellular Overview This webinar series introduces some of the comparative genomics and omics viewing tools available on the BioCyc site, including the cellular overview, comparative genomics tools, the ortholog viewer, and the metabolic omics viewer. Mon, 23 Apr 2007 16:09:00 -0800 11:41 BioCyc, Bioinformatics, SRI International ptools-info@ai.sri.com (SRI International)no http://bioinformatics.ai.sri.com/ptools/webinars/webinars-intbiocyc/WEBINARINTBIO05.mov SRI International Introduction to BioCyc - Part 5: Proteins and Reactions This webinar series introduces you to the BioCyc.org site and our extensive collection over nearly 250 model organism databases. In Part 5 of 5, we round out our introductory tour with a discussion of proteins, protein complexes, and metabolic reactions. Mon, 2 Apr 2007 12:02:00 -0800 12:21 BioCyc, Bioinformatics, SRI International ptools-info@ai.sri.com (SRI International)no http://bioinformatics.ai.sri.com/ptools/webinars/webinars-intbiocyc/WEBINARINTBIO04.mov SRI International Introduction to BioCyc - Part 4: Genes, Operons, and the Genome Browser This webinar series introduces you to the BioCyc.org site and our extensive collection over nearly 250 model organism databases. In Part 4 of 5, we move over to genes, looking at how we capture information on genes, operons, transcriptional regulation, and the whole genome, including an overview of our genome browser. Mon, 2 Apr 2007 12:00:00 -0800 18:30 BioCyc, Bioinformatics, SRI International ptools-info@ai.sri.com (SRI International)no http://bioinformatics.ai.sri.com/ptools/webinars/webinars-intbiocyc/WEBINARINTBIO03.mov SRI International Introduction to BioCyc - Part 3: Pathways This webinar series introduces you to the BioCyc.org site and our extensive collection over nearly 250 model organism databases. In Part 3of 5, we look at how metabolic pathways are captured in a BioCyc database, including pathway summaries, pathway diagrams, and regulatory information. Mon, 2 Apr 2007 11:54:00 -0800 12:57 BioCyc, Bioinformatics, SRI International ptools-info@ai.sri.com (SRI International)no http://bioinformatics.ai.sri.com/ptools/webinars/webinars-intbiocyc/WEBINARINTBIO02.mov SRI International Introduction to BioCyc - Part 2: Compounds and Transporters This webinar series introduces you to the BioCyc.org site and our extensive collection over nearly 250 model organism databases. In Part 2 of 5, we look at how compounds and transporters are represented in a BioCyc model organism database. Mon, 2 Apr 2007 11:52:00 -0800 12:29 BioCyc, Bioinformatics, SRI International ptools-info@ai.sri.com (SRI International)no http://bioinformatics.ai.sri.com/ptools/webinars/webinars-intbiocyc/WEBINARINTBIO01.mov SRI International Introduction to BioCyc - Part 1: What's BioCyc All About? This video series introduces you to the BioCyc.org site and our extensive collection over nearly 250 model organism databases. In Part 1 of 5, we look at the site's contents and how you can use searches, hierarchical browsing and other features to find exactly what you need in our extensive collection of metabolic and genome information. Mon, 2 Apr 2007 11:48:00 -0800 20:10 BioCyc, Bioinformatics, SRI International ptools-info@ai.sri.com (SRI International)no