Cafe RouGE News Feed http://www.cafevariome.org/ Wed, 30 May 2012 18:10:00 GMT FeedCreator 1.8.0-dev (info@mypapit.net) Data Discovery Unavailable http://www.cafevariome.org/discover-variants Due to technical difficulties data discovery is currently unavailable. We are working to resolve these issues and hope to have service returned to normal as soon as possible.

]]> ol8@le.ac.uk (Administrator) Tue, 24 Apr 2012 13:40:13 GMT http://www.cafevariome.org/discover-variants Alamut 2.1 - with Cafe Variome submit functionality http://www.cafevariome.org/component/content/article/1-news/25-alamut-21-with-cafe-variome-submit-functionality Submit your variants to Cafe Variome using Alamut version 2.1

The latest version of Alamut allows users to generate variant reports in the Cafe Variome format which can then be passed onto Cafe Variome for submission. See the following instructions for further details.

]]> ol8@le.ac.uk (Administrator) Wed, 28 Dec 2011 00:00:00 GMT http://www.cafevariome.org/component/content/article/1-news/25-alamut-21-with-cafe-variome-submit-functionality Gensearch Update http://www.cafevariome.org/component/content/article/1-news/24-gensearch-update Second version of "Cafe Variome enabled" Gensearch is now available

The updated version of Gensearch (build 4.0.4) has been released with updated and more sophisticated functionaltiy for submitting variants to Cafe Variome. Users of Gensearch should use the following simple instructions in order to prepare their installation for submission.

]]> ol8@le.ac.uk (Administrator) Mon, 12 Dec 2011 00:00:00 GMT http://www.cafevariome.org/component/content/article/1-news/24-gensearch-update DAS source available http://www.cafevariome.org/component/content/article/1-news/21-das-source-available DAS Source Now Available

To allow viewing of Cafe Variome variants in popular genome browsers a DAS source and DAS Registry entry have been created.

]]> ol8@le.ac.uk (Administrator) Mon, 05 Sep 2011 11:19:24 GMT http://www.cafevariome.org/component/content/article/1-news/21-das-source-available BSHG 2011 http://www.cafevariome.org/component/content/article/1-news/18-bshg-2011 Cafe Variome will be presenting at the BSHG 2011 meeting.

11:45am - Conference Room, Arts Centre 7th September

See program for details

]]> ol8@le.ac.uk (Administrator) Sun, 04 Sep 2011 20:52:52 GMT http://www.cafevariome.org/component/content/article/1-news/18-bshg-2011 HGMD data collaboration http://www.cafevariome.org/component/content/article/1-news/19-hgmd-data-collaboration Human Gene Mutation Database Collaboration

A data collaboration with the Human Gene Mutation Database has been agreed to enable discovery of HGMD public variants via Cafe Variome.

]]> ol8@le.ac.uk (Administrator) Thu, 25 Aug 2011 00:00:00 GMT http://www.cafevariome.org/component/content/article/1-news/19-hgmd-data-collaboration ESHG 2011 http://www.cafevariome.org/component/content/article/1-news/20-eshg-poster Cafe Variome presented a poster at the ESHG 2011 meeting.

Download the poster.

]]> ol8@le.ac.uk (Administrator) Tue, 31 May 2011 00:00:00 GMT http://www.cafevariome.org/component/content/article/1-news/20-eshg-poster Cafe RouGE is now Cafe Variome! http://www.cafevariome.org/component/content/article/1-news/16-cafe-rouge-is-now-cafe-variome Cafe RouGE -> Cafe Variome

Cafe RouGE is now known as Cafe Variome to better reflect the scope of content.

]]> ol8@le.ac.uk (Administrator) Tue, 12 Apr 2011 14:12:47 GMT http://www.cafevariome.org/component/content/article/1-news/16-cafe-rouge-is-now-cafe-variome Cafe RouGE Goes Live! http://www.cafevariome.org/component/content/article/1-news/13-cafe-rouge-goes-live Cafe RouGE goes live with the following variant content:
  • Diagnostic laboratories: 162 variants
  • dbSNP (b131 coding): 194739 variants
  • UniProt: 23728 variants
  • PhenCode: 24753 variants

Cafe RouGE enabled diagnostic software:

]]> ol8@le.ac.uk (Administrator) Fri, 25 Feb 2011 10:27:18 GMT http://www.cafevariome.org/component/content/article/1-news/13-cafe-rouge-goes-live