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	<title>Macs in Chemistry</title>
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		<title>9th Artificial Intelligence in Chemistry Symposium</title>
		<link>https://macinchem.org/2026/05/28/9th-artificial-intelligence-in-chemistry-symposium/</link>
		
		<dc:creator><![CDATA[chris]]></dc:creator>
		<pubDate>Thu, 28 May 2026 19:27:01 +0000</pubDate>
				<category><![CDATA[Macinchem Blog]]></category>
		<category><![CDATA[meetings]]></category>
		<category><![CDATA[artificial intelligence]]></category>
		<category><![CDATA[cheminformatics]]></category>
		<category><![CDATA[CICAG]]></category>
		<category><![CDATA[machine learning]]></category>
		<category><![CDATA[RSC]]></category>
		<guid isPermaLink="false">https://macinchem.org/?p=3026</guid>

					<description><![CDATA[When Nathan Brown and I first discussed a proposed Artificial Intelligence in Chemistry meeting a decade ago we were concerned that the event might not]]></description>
										<content:encoded><![CDATA[
<p class="wp-block-paragraph">When Nathan Brown and I first discussed a proposed Artificial Intelligence in Chemistry meeting a decade ago we were concerned that the event might not generate much interest. We now have a fabulous expanded organising committee for a three day event that includes a workshop. I just checked and we have nearly 70 submitted abstracts covering a wide variety of topics! The committee will be reviewing them over the next few days. This meeting seems to get better every year and we have a fantastic lineup of speakers, the confirmed are shown below.</p>



<p class="wp-block-paragraph"><strong>Andrew White,&nbsp;</strong><em>Edison Scientific<br></em><strong><br>Jackson Burns,&nbsp;</strong><em>MIT<br></em>CheMeleon: Deep Learning Foundation Models from Classical Molecular Descriptors<br><strong><br>Layla Hosseini-Gerami,&nbsp;</strong><em>Ignota Labs<br></em>Towards improved activity cliff prediction in homologous chemical series</p>



<p class="wp-block-paragraph"><strong>Patrick Walters,&nbsp;</strong><em>OpenADMET<br></em>OpenADMET – Elevating ADMET Prediction Through Open Science<br><strong><br>Gabriele Corso,&nbsp;</strong><em>Boltz<br></em>Boltz: Towards Accurate Biomolecular Modeling and Design</p>



<p class="wp-block-paragraph"><strong>Lauren Delong,</strong>&nbsp;<em>University of Edinburgh and Enveda<br></em>Neurosymbolic AI for Drug Discovery: Current State, Limitations, and the Path Forward<em></em></p>



<p class="wp-block-paragraph"><strong>Teresa Head-Gordon,</strong>&nbsp;<em>University of California, Berkeley<br></em>Machine Learning Foundations and Large&nbsp;Language Models are Here for Molecular&nbsp;Discovery<em></em></p>



<p class="wp-block-paragraph"><strong>Jacqui Cole,</strong>&nbsp;<em>University of Cambridge<br></em>Data-driven Materials Chemistry</p>



<p class="wp-block-paragraph"><strong>Kathryn Giblin,</strong>&nbsp;<em>AstraZeneca<br></em>From Generative AI Methods to Delivered Chemical Series: Experiences of Applying AI to Real Drug Projects<em></em></p>



<p class="wp-block-paragraph"><strong>Julia Westermayr,</strong>&nbsp;<em>University of Leipzig</em><em></em></p>



<p class="wp-block-paragraph"><strong>Giulio Volpin,&nbsp;</strong><em>Bayer<br></em>Data Science-Assisted Workflows for Reaction Optimization in Process Chemistry<em></em></p>



<p class="wp-block-paragraph"><strong>Rebecca Paul,&nbsp;</strong><em>Isomorphic Labs</em></p>



<p class="wp-block-paragraph">Registration is open here </p>



<p class="wp-block-paragraph"><a href="https://www.eventsforce.net/hg3/351/register">https://www.eventsforce.net/hg3/351/register</a></p>



<p class="wp-block-paragraph">There is also exhibitor space available.</p>



<p class="wp-block-paragraph"><a href="https://www.eventsforce.net/hg3/351/register">https://www.eventsforce.net/hg3/351/register</a></p>



<p class="wp-block-paragraph"><strong>Exhibition stand package is priced at £1,400 and includes:</strong><br>– A six-foot trestle table and chair(s);<br>– Access to electricity and Wi-fi;<br>– Logo inclusion in pdf delegate handbook and rolling slides;<br>– Exhibitors promotional page in the pdf delegate handbook;<br>– Logo included in the communication emails to delegates;<br>– One exhibitor stand staff with access to the technical sessions and Conference dinner (excluding accommodation)</p>



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		<item>
		<title>TabPFN-3: Technical Report</title>
		<link>https://macinchem.org/2026/05/18/tabpfn-3-technical-report/</link>
		
		<dc:creator><![CDATA[chris]]></dc:creator>
		<pubDate>Mon, 18 May 2026 07:55:13 +0000</pubDate>
				<category><![CDATA[Data Analysis Tools]]></category>
		<category><![CDATA[Hints and Tutorials]]></category>
		<category><![CDATA[Macinchem Blog]]></category>
		<guid isPermaLink="false">https://macinchem.org/?p=3019</guid>

					<description><![CDATA[I&#8217;ve written about TabPFN previously https://macinchem.org/2025/02/06/looking-at-tabpfn/ and I see a technical report has just been published. https://priorlabs.ai/technical-reports/tabpfn-3 TabPFN is a foundation model  trained on around 130,000,000]]></description>
										<content:encoded><![CDATA[
<p class="wp-block-paragraph">I&#8217;ve written about TabPFN previously <a href="https://macinchem.org/2025/02/06/looking-at-tabpfn/">https://macinchem.org/2025/02/06/looking-at-tabpfn/</a> and I see a technical report has just been published.</p>



<p class="wp-block-paragraph"><a href="https://priorlabs.ai/technical-reports/tabpfn-3">https://priorlabs.ai/technical-reports/tabpfn-3</a></p>



<p class="wp-block-paragraph"><a href="https://doi.org/10.1038/s41586-024-08328-6">TabPFN</a> is a foundation model  trained on around 130,000,000 synthetically generated datasets that mimic “real world” tabular data. These datasets sampled dataset size and number of features, both classification and regression tasks, and Gaussian noise was added to mimic real-world complexities. This can then be used to build models for small- to medium-sized datasets with up to 10,000 samples and 500 features and is claimed to be superior to other methods.</p>



<blockquote class="wp-block-quote is-layout-flow wp-block-quote-is-layout-flow">
<p class="wp-block-paragraph"><strong>A new performance standard.</strong> On the standard tabular benchmark TabArena, a forward pass of TabPFN-3 outperforms all other models, including tuned and ensembled baselines, by a significant margin, and pareto-dominates the speed/performance frontier. TabPFN-3 also scales to more diverse datasets: it ranks first on datasets with many classes, and beats 8-hour-tuned gradient-boosted-tree baselines on datasets up to 1M training rows and 200 features.</p>
</blockquote>



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		<title>Building a 3D Pharmacophore Model from PDB Data: A free Python Workflow</title>
		<link>https://macinchem.org/2026/05/16/building-a-3d-pharmacophore-model-from-pdb-data-a-free-python-workflow/</link>
		
		<dc:creator><![CDATA[chris]]></dc:creator>
		<pubDate>Sat, 16 May 2026 07:30:13 +0000</pubDate>
				<category><![CDATA[Hints and Tutorials]]></category>
		<category><![CDATA[Macinchem Blog]]></category>
		<category><![CDATA[python]]></category>
		<guid isPermaLink="false">https://macinchem.org/?p=3017</guid>

					<description><![CDATA[https://www.linkedin.com/feed/update/urn:li:activity:7461059877155631105 A fantastic step-by-step breakdown of an example Python pipeline used to build a ligand-based 3D pharmacophore model using free, open-source tools.]]></description>
										<content:encoded><![CDATA[
<p class="wp-block-paragraph"><a href="https://www.linkedin.com/feed/update/urn:li:activity:7461059877155631105">https://www.linkedin.com/feed/update/urn:li:activity:7461059877155631105</a></p>



<p class="wp-block-paragraph">A fantastic step-by-step breakdown of an example Python pipeline used to build a ligand-based 3D pharmacophore model using free, open-source tools.</p>



<figure class="wp-block-image size-full"><img fetchpriority="high" decoding="async" width="800" height="625" src="https://macinchem.org/wp-content/uploads/2026/05/1778855292853.jpg" alt="" class="wp-image-3016" srcset="https://macinchem.org/wp-content/uploads/2026/05/1778855292853.jpg 800w, https://macinchem.org/wp-content/uploads/2026/05/1778855292853-300x234.jpg 300w, https://macinchem.org/wp-content/uploads/2026/05/1778855292853-768x600.jpg 768w" sizes="(max-width: 800px) 100vw, 800px" /></figure>



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		<item>
		<title>September Meetings</title>
		<link>https://macinchem.org/2026/05/11/september-meetings/</link>
		
		<dc:creator><![CDATA[chris]]></dc:creator>
		<pubDate>Mon, 11 May 2026 08:41:46 +0000</pubDate>
				<category><![CDATA[Macinchem Blog]]></category>
		<category><![CDATA[cheminformatics]]></category>
		<category><![CDATA[meeting]]></category>
		<guid isPermaLink="false">https://macinchem.org/?p=3011</guid>

					<description><![CDATA[If you are coming to the 9th RSC-CICAG / RSC-BMCS Artificial Intelligence in Chemistry meeting in Cambridge 2-4 September 2026. You might also be interested]]></description>
										<content:encoded><![CDATA[
<p class="wp-block-paragraph">If you are coming to the <a href="https://www.rscbmcs.org/events/aichem9/">9th RSC-CICAG / RSC-BMCS Artificial Intelligence in Chemistry</a> meeting in Cambridge 2-4 September 2026.  You might also be interested in the Cambridge Cheminformatics Network Meeting 1 September 2026.</p>



<p class="wp-block-paragraph">The Cambridge Cheminformatics Network Meetings are free to attend and open to all. We start our meetings in the afternoon at 4pm (UK time) with a series of short scientific talks, currently in hybrid mode on Zoom and at the <a href="https://map.cam.ac.uk/?maplon=0.12662&amp;maplat=52.19769&amp;mapzoom=17&amp;maplayers=Building+Labels%2CExternal+Sites%2CColleges%2CUniversity+Sites%2CBuildings%2CTransport&amp;mapfeature=mfid344%2CBuildings" target="_blank" rel="noreferrer noopener">Cambridge Crystallographic Data Centre</a> (CCDC) in person,  usually followed by a social at the Panton Arms and an &#8216;Online Worldwide Cheminformatics Pub Night&#8217;!</p>



<p class="wp-block-paragraph">Details are on the website <a href="https://www.c-inf.net">https://www.c-inf.net</a></p>



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		<item>
		<title>OpenBind’s First Data and Model Release</title>
		<link>https://macinchem.org/2026/05/07/openbinds-first-data-and-model-release/</link>
		
		<dc:creator><![CDATA[chris]]></dc:creator>
		<pubDate>Thu, 07 May 2026 16:11:11 +0000</pubDate>
				<category><![CDATA[Macinchem Blog]]></category>
		<category><![CDATA[artificial intelligence]]></category>
		<category><![CDATA[cheminformatics]]></category>
		<category><![CDATA[compchem]]></category>
		<category><![CDATA[machine learning]]></category>
		<category><![CDATA[openbind]]></category>
		<guid isPermaLink="false">https://macinchem.org/?p=3009</guid>

					<description><![CDATA[Lack of data has hampered the building of models to accurately predict binding affinity so I&#8217;m sure everyone is super excited to see the first]]></description>
										<content:encoded><![CDATA[
<p class="wp-block-paragraph">Lack of data has hampered the building of models to accurately predict binding affinity so I&#8217;m sure everyone is super excited to see the first tranche of data from OpenBind.</p>



<p class="wp-block-paragraph">All the data is freely available here <a href="https://openbind.uk/documents-and-tools/">https://openbind.uk/documents-and-tools/</a></p>



<blockquote class="wp-block-quote is-layout-flow wp-block-quote-is-layout-flow">
<p class="wp-block-paragraph">The UK‑led OpenBind initiative has reached a major milestone with the announcement of the release of its first publicly available dataset and predictive AI model, a groundbreaking step toward accelerating the discovery of new medicines using artificial intelligence.</p>
</blockquote>



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		<item>
		<title>Quantum Computing in Chemistry Conference</title>
		<link>https://macinchem.org/2026/05/01/quantum-computing-in-chemistry-conference/</link>
		
		<dc:creator><![CDATA[chris]]></dc:creator>
		<pubDate>Fri, 01 May 2026 08:01:01 +0000</pubDate>
				<category><![CDATA[Macinchem Blog]]></category>
		<category><![CDATA[meetings]]></category>
		<category><![CDATA[CICAG]]></category>
		<category><![CDATA[quantum computing]]></category>
		<guid isPermaLink="false">https://macinchem.org/?p=3005</guid>

					<description><![CDATA[RSC CICAG Quantum Computing in Chemistry: Current Capabilities and the Road to UtilityThursday 19th November 2026, Burlington House, London, UK https://registrations.hg3conferences.co.uk/hg3/frontend/reg/thome.csp?pageID=148219&#38;ef_sel_menu=2770&#38;eventID=363 Quantum computing has the]]></description>
										<content:encoded><![CDATA[
<p class="wp-block-paragraph">RSC CICAG Quantum Computing in Chemistry: Current Capabilities and the Road to Utility<br>Thursday 19th November 2026, Burlington House, London, UK</p>



<p class="wp-block-paragraph"><a href="https://registrations.hg3conferences.co.uk/hg3/frontend/reg/thome.csp?pageID=148219&amp;ef_sel_menu=2770&amp;eventID=363">https://registrations.hg3conferences.co.uk/hg3/frontend/reg/thome.csp?pageID=148219&amp;ef_sel_menu=2770&amp;eventID=363</a></p>



<blockquote class="wp-block-quote is-layout-flow wp-block-quote-is-layout-flow">
<p class="wp-block-paragraph">Quantum computing has the potential to revolutionise computational science but has yet to do so. What has it done for chemistry already, what can it do now, and what might it be able to do in the future? This meeting will bring together people working on the applications of quantum computing to chemistry. It will focus on current capabilities and analyse the road to utility. Is quantum computing useful now in addressing specific molecular problems? When will we reach the milestones needed to expand its utility? It will be useful for chemists working in electronic structure theory, molecular design, property prediction and modelling chemical processes. It will answer the questions of what can be done now in each of these fields, and how long we might need to wait for practical quantum computing tools. </p>
</blockquote>



<p class="wp-block-paragraph">This meeting is now accepting <a href="https://registrations.hg3conferences.co.uk/hg3/frontend/reg/tOtherPage.csp?pageID=148005&amp;ef_sel_menu=2781&amp;eventID=363">oral and poster abstract submissions</a>.</p>



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		<title>nanoFold a Protein Folding Data-Efficiency Competition</title>
		<link>https://macinchem.org/2026/04/29/nanofold-a-protein-folding-data-efficiency-competition/</link>
		
		<dc:creator><![CDATA[chris]]></dc:creator>
		<pubDate>Wed, 29 Apr 2026 07:17:35 +0000</pubDate>
				<category><![CDATA[Macinchem Blog]]></category>
		<category><![CDATA[artificial intelligence]]></category>
		<category><![CDATA[machine learning]]></category>
		<category><![CDATA[protein structure]]></category>
		<guid isPermaLink="false">https://macinchem.org/?p=3003</guid>

					<description><![CDATA[An interesting way to look for better biological foundation models. The core bet is simple: biological data is expensive. Text and image models often improve]]></description>
										<content:encoded><![CDATA[
<p class="wp-block-paragraph">An interesting way to look for better biological foundation models.</p>



<blockquote class="wp-block-quote is-layout-flow wp-block-quote-is-layout-flow">
<p class="wp-block-paragraph">The core bet is simple: biological data is expensive. Text and image models often improve by consuming more data, but protein structure data is far more constrained, far harder to generate, and far more sensitive to leakage. If we want better biological foundation models, we need architectures and training methods that make stronger use of the data we already have.</p>
</blockquote>



<p class="wp-block-paragraph">Full details are on GitHub <a href="https://github.com/ChrisHayduk/nanoFold-Competition">https://github.com/ChrisHayduk/nanoFold-Competition</a></p>



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		<item>
		<title>PyChem-Pro</title>
		<link>https://macinchem.org/2026/04/27/pychem-pro/</link>
		
		<dc:creator><![CDATA[chris]]></dc:creator>
		<pubDate>Mon, 27 Apr 2026 11:26:56 +0000</pubDate>
				<category><![CDATA[Macinchem Blog]]></category>
		<category><![CDATA[Science Apps]]></category>
		<category><![CDATA[cheminformatics]]></category>
		<category><![CDATA[python]]></category>
		<guid isPermaLink="false">https://macinchem.org/?p=3001</guid>

					<description><![CDATA[I&#8217;ve just added PyChem-Pro to the list of cheminformatics toolkits https://macinchem.org/2023/02/17/open-source-cheminformatics-toolkits/ PyChem is a desktop chemistry application and Python library that combines molecular visualization (like]]></description>
										<content:encoded><![CDATA[
<p class="wp-block-paragraph">I&#8217;ve just added PyChem-Pro to the list of cheminformatics toolkits <a href="https://macinchem.org/2023/02/17/open-source-cheminformatics-toolkits/">https://macinchem.org/2023/02/17/open-source-cheminformatics-toolkits/</a></p>



<blockquote class="wp-block-quote is-layout-flow wp-block-quote-is-layout-flow">
<p class="wp-block-paragraph">PyChem is a desktop chemistry application and Python library that combines molecular visualization (like PyMOL) with cheminformatics primitives (like RDKit). Unlike most tools in the space, PyChem is <strong>pure Python with NumPy</strong>. There is no C++ extension, no RDKit dependency, no OpenBabel binding. Every feature — SMILES parsing, 3D coordinate generation, force field optimization, descriptor calculation, Shrake-Rupley SASA, ring perception, protein cartoon rendering — is implemented from scratch and readable end-to-end.</p>
</blockquote>



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		<item>
		<title>Sweet J on Mac App Store</title>
		<link>https://macinchem.org/2026/04/25/sweet-j-on-mac-app-store/</link>
		
		<dc:creator><![CDATA[chris]]></dc:creator>
		<pubDate>Sat, 25 Apr 2026 06:46:35 +0000</pubDate>
				<category><![CDATA[Macinchem Blog]]></category>
		<category><![CDATA[Science Apps]]></category>
		<category><![CDATA[Spectroscopy]]></category>
		<category><![CDATA[cheminformatics]]></category>
		<guid isPermaLink="false">https://macinchem.org/?p=2994</guid>

					<description><![CDATA[Calculates the&#160;3J coupling constant from the dihedral angle and the electronegativity of the substituents using either the Altona equation or a generalised Karplus equation. Sweet]]></description>
										<content:encoded><![CDATA[
<p class="wp-block-paragraph">Calculates the&nbsp;<sup>3</sup>J coupling constant from the dihedral angle and the electronegativity of the substituents using either the Altona equation or a generalised Karplus equation.</p>



<figure class="wp-block-image size-full"><img decoding="async" width="800" height="710" src="https://macinchem.org/wp-content/uploads/2026/04/sweetj.png" alt="" class="wp-image-2995" srcset="https://macinchem.org/wp-content/uploads/2026/04/sweetj.png 800w, https://macinchem.org/wp-content/uploads/2026/04/sweetj-300x266.png 300w, https://macinchem.org/wp-content/uploads/2026/04/sweetj-768x682.png 768w" sizes="(max-width: 800px) 100vw, 800px" /></figure>



<p class="wp-block-paragraph">Sweet J can be downloaded here <a href="https://www.inmr.net/sweetj.html">https://www.inmr.net/sweetj.html</a></p>



<p class="wp-block-paragraph">Giuseppe Balacco<br><strong>A Desktop Calculator for the Karplus Equation</strong><br><em>J. Chem. Inf. Comput. Sci.</em>, <strong>1996</strong>, <em>36</em> (4), pp 885–887<br>DOI: <a href="http://dx.doi.org/10.1021/ci950227r">10.1021/ci950227r</a></p>



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		<title>AI Discovery Awards</title>
		<link>https://macinchem.org/2026/04/24/ai-discovery-awards/</link>
		
		<dc:creator><![CDATA[chris]]></dc:creator>
		<pubDate>Fri, 24 Apr 2026 10:05:20 +0000</pubDate>
				<category><![CDATA[Macinchem Blog]]></category>
		<category><![CDATA[funding]]></category>
		<guid isPermaLink="false">https://macinchem.org/?p=2992</guid>

					<description><![CDATA[AI Discovery by Nebius is an annual awards for startups that are leveraging AI to revolutionize drug discovery, biotechnology, genomics and HealthTech.. Details are here https://nebius.com/ai-discovery-award Submission deadline is April 30]]></description>
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<p class="wp-block-paragraph">AI Discovery by Nebius is an annual awards for startups that are leveraging AI to revolutionize drug discovery, biotechnology, genomics and HealthTech..</p>



<p class="wp-block-paragraph">Details are here <a href="https://nebius.com/ai-discovery-award">https://nebius.com/ai-discovery-award</a>  Submission deadline is April 30 2026.</p>



<p class="wp-block-paragraph">1st place $100,000, 2nd place $50,000 and 3rd place $30,000.  </p>



<p class="wp-block-paragraph">Each participant should have a legal entity, a functioning website, product MVP and GTM strategy.</p>



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